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| VISTA |
VISTA news archiveApril 2007 New alignments for the March 2006 Human assembly are available. Recently released UCSC Genes annotation is added to the comparative tracks. December 2006 Added whole-genome multiple alignment of Human May 2004 -- Dog May 2005 -- Mouse Aug. 2005 -- Rat June 2003 -- Chicken Feb. 2004 November 2006 VISTA training session at the American Heart Association Meeting, November 12 October 2006 Lawrence Berkeley National Laboratory and OpenHelix announce comprehensive training programs for VISTA. Details. August 2006 New tool added: You can now submit two microbial genomes up to 10Mb each for alignment and comparative analysis. VISTA Browser Updates: SNPs from dbSNP build 123, are now shown above a conservation curve. Details. PolyPhen predictions for SNPs in coding exons are added to SNP info displayed in a base-pair alignment window. Details. April 2006 VISTA portal is linked to VISTA Enhancer Browser, a central resource for experimentally tested extremely conserved human noncoding fragments for gene enhancer activity in transgenic mice. New features of VISTA Browser: a browsable base-pair alignment window and display of SNPs. Details. Added whole genome alignments of: December 2005 Added whole genome alignments of: October 2005 rVISTA is now using the TRANSFAC Professional 9.2 (June 30, 2005) library. September 2005 Added whole genome alignments of: August 2005 Added whole genome alignments of: July 2005 Added whole genome alignment of: June 2005 Added whole genome alignment of: May 2005 Added whole genome alignment of Human May 2004 vs. Chicken February 2004, Rat June 2003. April 2005 RankVISTA regions are now automatically computed for all user requests. March 2005 New Tool: Whole Genome rVISTABeta Added whole genome alignments of Drosophila Melanogaster Apr. 2004 vs D. pseudoobscura, D. yakuba, D. ananassae, D. mojavensis, D. virilis, and D. erecta. Genscan and RefSeq annotations from UCSC are provided where available. February 2005 mVista and rVista servers have been upgraded to provide dynamic visualization, faster processing times, and a choice of alignment programs -- you can now choose from AVID, LAGAN, or Shuffle-LAGAN. Also note the new URL for our server, http://genome.lbl.gov/vista Added whole genome alignments: November 2004 Added whole genome alignments: October 2004 We no longer support the first version of the Vista Browser. Please use the current browser to see whole genome alignments of multiple organisms. September 2004 Added whole genome alignments: August 2004 Added whole genome alignment: June 2004 Added whole genome alignments: April 2004 Added whole genome alignments: March 2004 VISTA site has been completely redesigned for clarity and ease of use, as well as improved integration of the various VISTA tools. We welcome your comments. February 2004 Whole-genome alignments of new groups of organisms are available. In addition to the three-way alignment of human/mouse/rat and the pairwise alignment of D.melanogaster/D.pseudoobscura you can now access the pairwise alignments of C.elegans/ C.briggsae and Arabidopsis/Rice through our VISTA Browser. |