Tools for Comparative Genomics

 
 

Database Connection File (.db)

Comments:

Line 1: specify the delimiter you would like to use to format the file such as --###--
Line 2: dbtype, the database type. Legal values are MySQL, Oracle, Derby.
Line 3: username, specify the username for the database.
Line 4: password, specify the password for the database.
Line 5: URL, the URL for the database. Ask your DB administrator if you need assistance.
Line 6: driver class. You will need to install a JDBC driver for your database. We support MySQL, Oracle and Derby. Ask you DB administrator if you have need assistance.

Example:

delimiter--###--
dbtype--###--Derby
username--###--user1
password--###--password1
url--###--jdbc:derby:SampleDB;
driverclass--###--org.apache.derby.jdbc.EmbeddedDriver

Also available:

SampleDBDerby.db
SampleDBOracle.db
SampleDBMySQL.db